| 1. Main Title | not rated | 3:08 |
| 2. Botany Bay | not rated | 0:44 |
| 3. Surprise Attack | not rated | 5:08 |
| 4. Spock | not rated | 1:13 |
| 5. Kirk's Explosive Reply | not rated | 4:02 |
| 6. That's Better Shuttle Approach | not rated | 3:48 |
| 7. Khan's Pets | not rated | 4:19 |
| 8. Enterprise Clears Moorings | not rated | 3:36 |
| 9. Khan Sets The Trap | not rated | 0:31 |
| 10. Battle in the Mutara Nebula | not rated | 8:05 |
| 11. Genesis Countdown | not rated | 6:36 |
| 12. Kirk Takes Command | not rated | 1:16 |
| 13. Epilogue/End Title | not rated | 8:43 |
| 14. He Tasks Me (with Faint Dialogue) | not rated | 0:27 |
| 15. McCoy's Grisley Discovery | not rated | 1:14 |
| 16. Debriefing Terrell And Chekov | not rated | 0:51 |
| 17. Kill Admiral Kirk | not rated | 1:58 |
| 18. Buried Alive | not rated | 0:48 |
| 19. Can I Cook Or Can't I | not rated | 1:09 |
| 20. Kirk Strikes Back | not rated | 1:30 |
| 21. Spock's Death | not rated | 1:53 |
| 22. Spock's Funeral | not rated | 1:22 |
| 1:02:21 |
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